1 Introduction
2 Glossary
3 Gene Net Mode
4 Workspace in the Gene Net Mode
    4.1 Menu Bar Commands
       4.1.1 File | New
       4.1.2 File | Open
       4.1.3 File | Open Recent Files
       4.1.4 File | Close File
       4.1.5 File | Close All Files
       4.1.6 File | Save
       4.1.7 File | Save as
       4.1.8 File | Import | GN Text File
       4.1.9 File | Export
       4.1.10 File | Look&Feel
       4.1.11 File | Print
       4.1.12 File | Exit
       4.1.13 Edit | Undo
       4.1.14 Edit | Redo
       4.1.15 Edit | Cut
       4.1.16 Edit | Copy
       4.1.17 Edit | Paste
       4.1.18 Edit | Delete
       4.1.19 Edit | Duplicate
       4.1.20 Edit | Extract
       4.1.21 Edit | Select All
       4.1.22 Edit | Select None
       4.1.23 Edit | Select Inverse
       4.1.24 Edit | Align Selected Elements to Grid
       4.1.25 Edit | Align all elements to Grid
       4.1.26 Edit | Align to
       4.1.27 Edit | Insert Entity
       4.1.28 Edit | Insert Image
       4.1.29 Edit | Insert Text
       4.1.30 Edit | Insert Frame
       4.1.31 Element | Transform
       4.1.32 Element | Arrange
       4.1.33 Element | Group
       4.1.34 Element | Ungroup
       4.1.35 Element | Fill Color
       4.1.36 Element | Line Color
       4.1.37 Element | Stroke
       4.1.38 Element | Edit Image
       4.1.39 Element | References
       4.1.40 Element | References | Add/Edit URL
       4.1.41 Element | URL Templates
       4.1.42 Element | Comments
       4.1.43 Element | Text
       4.1.44 Element | Font
       4.1.45 Element | Show Element
       4.1.46 Element | Show Name
       4.1.47 Element | Show Edge Score
       4.1.48 Element | Show Comment
       4.1.49 View | Gene Net Mode
       4.1.50 View | Show Name
       4.1.51 View | Show Comment
       4.1.52 View | Show Edge Score
       4.1.53 View | Color by Edge Type
       4.1.54 View | Zoom In
       4.1.55 View | Zoom Out
       4.1.56 View | Fit in Canvas
       4.1.57 View | Actual Size
       4.1.58 View | Show Grid
       4.1.59 View | Antialiasing
       4.1.60 View | Grid Size
       4.1.61 View | Background Color
       4.1.62 Analyze | Add to Subnet
       4.1.63 Analyze | Remove from Subnet
       4.1.64 Analyze | Clear Subnet
       4.1.65 Analyze | Extract Subnet
       4.1.66 Analyze | Subnets
       4.1.67 Analyze | Select | Children
       4.1.68 Analyze | Select | Parents of Children
       4.1.69 Analyze | Select | Children and Parents of Children
       4.1.70 Analyze | Select | Parents
       4.1.71 Analyze | Select | Siblings
       4.1.72 Analyze | Select | Parents and Siblings
       4.1.73 Analyze | Keyword Search
       4.1.74 Analyze | Pathway Search
       4.1.75 Analyze | Gene List Search
       4.1.76 Analyze | Merge
       4.1.77 Analyze | Gene Mining
       4.1.78 Analyze | Expression Plot
       4.1.79 Analyze | Partial Residual Plot
       4.1.80 Dialog | Hide All Dialogs
       4.1.81 Dialog | Element Lists
       4.1.82 Dialog | Element Settings
       4.1.83 Dialog | Preferences
       4.1.84 Dialog | Graph Layout
       4.1.85 Window | Cascade Canvases
       4.1.86 Window | Tile Canvases
       4.1.87 Window | Minimize All Canvases
       4.1.88 Window | Maximize All Canvases
       4.1.89 Window | Duplicate Canvases
       4.1.90 Help | Cell Illustrator Help
       4.1.91 Help | Cell Illustrator User Guide
       4.1.92 Help | Cell Illustrator Online
       4.1.93 Help | GNI Website
       4.1.94 Help | About Cell Illustrator
    4.2 CI Toolbars
5 Drawing Canvas
6 Element Lists
7 Element Settings
8 Preferences
9 Graph Layout
10 Keyword Search
11 Pathway Search
12 Pathway Search Results
13 Subnets
14 Gene List Search
15 Expression Plot
16 Partial Residual Plot
17 Gene Mining
18 Print Model
19 External References
20 Add/Edit References
21 Save Dialog
22 About Cell Illustrator