Since the version 3.0, Cell Illustrator (CI) enables the users to view and analyze gene relationships networks. This functionality is available in the special Gene Net mode. The graphical user interface of CI offers the user two modes of working:
(i) The Biopathway Modeling mode dedicated for simulation and modeling of complex biological processes and systems using Petri Net models. This mode is described separately in the CI User Guide and CI Reference Manual.
(ii) The new Gene Net dedicated for analysis and exploration of gene relationship networks - described in this manual
This manual is a reference for the functional features available in the Gene Net mode. It can be used to answer questions about specific system commands. For installation instructions and an introduction to gene relationship networks, please refer to the User Guide.
The documentation for the Cell Illustrator software includes the manuals listed below:
Cell Illustrator User Guide: Introduction to Cell Illustrator system
Cell Illustrator Reference Manual: Detailed description of Cell Illustrator functions
Cell Illustrator Player Reference Manual: Detailed description of Cell Illustrator Player functions
Cell Illustrator Server Installation Manual: Installation instructions for Cell Illustrator Server product (for IT System Administrators)
Cell Illustrator Gene Net Reference Manual: Detailed description of Cell Illustrator functions (Gene Net mode)
Cell Illustrator Gene Net User Guide: Introduction to the Gene Net mode of Cell Illustrator system