This dialog visualizes the partial residual plot for a selected edge. The partial residual plot is an improved version of the expression plot and displays more detailed information about the results of the micro array experiments, which have been executed to obtain this gene network.
Note: The expression plot is specific for the GNI technology of generating gene networks. The plot requires additional micro-array experiment data. Without this data the expression plot cannot e viewed.
The partial residual plot requires:
o the bspline data stored in edge comments
o expression plot file with additional experimental data that is not included in the gene network file.
To view the partial residual expression plot:
1. Make sure that the expression plot file is available in CI.
For this, open the Preferences dialog box and check that the Expression Plot File location is correctly defined in the Expression Plot section.
2. Select an edge on the canvas.
3. Choose Analyze | Partial Residual Plot from the menu or the Partial Residual Plot icon from the right side toolbar
4. Press the Freeze button to keep the selected plot
5. Select another edge to view its partial residual plot.